Detection of Methicillin Resistant Staphylococcus aureus and Associated Resistance Genes in Hospital Acquired Infections

Authors

  • Mushahid Hussain Clinical Laboratory Diagnostic, Xi'an Jiaotong University First Affiliated Hospital, Xi'an, China Author
  • Muhammad Ali Department of Allied Health Sciences, Superior College Lahore, Pakistan Author
  • Muhammad Bakir Department of Allied Health Sciences, Superior College Lahore, Pakistan Author
  • Hina Tariq Department of Environmental Science, National Institute of Health Islamabad / University of Peshawar, Pakistan Author

DOI:

https://doi.org/10.31580/gf8pa973

Keywords:

Methicillin resistant Staphylococcus aureus; MRSA; hospital acquired infections; antimicrobial resistance; resistance genes; mecA; multidrug resistance; PCR

Abstract

Background: The prevalence of multidrug-resistant methicillin-resistant Staphylococcus aureus (MRSA) is one of the primary causes of hospital-acquired infections worldwide and is a significant public health problem, further complicated by resistance genes like mecA, mecC and erm genes. Determine if MRSA is present and investigate the presence of the associated antimicrobial resistance genes in individuals with hospital acquired infections. Methods: Cross sectional study made in laboratory involving 120 clinical samples from the patients who were diagnosed as HAI. Staphylococcus aureus was isolated and identified from wound swabs, pus, blood, and urine using standard microbiological methods. Detection of MRSA was done by cefoxitin disc diffusion. The antimicrobial susceptibility testing was performed on commonly used antibiotics according to CLSI guidelines. PCR was used for molecular detection of resistance genes such as mecA, mecC, ermA, ermC, tetK and vanA. SPSS-26.0 software was used to statistically evaluate the data, and a p-value of less than 0.05 was considered statistically significant. Results: Out of 120 samples processed, 74 (61.7%) were positive for Staphylococcus aureus. Among these, 45 (60.8%) were confirmed as MRSA. The highest percentage of MRSA isolates (40.0%) was found in wound swab specimens. MRSA isolates were all resistant to penicillin and oxacillin and very high rates of resistance to erythromycin 34 (75.6%) and ciprofloxacin 29 (64.4%). The mecA gene was present in 41 (91.1%) of MRSA isolates while ermC was found in 24 (53.3%) and ermA in 19 (42.2%). There was a significant correlation between mecA positivity and multidrug resistance (p=0.012). Vancomycin and linezolid were the most active agents, with most isolates being susceptible. Conclusion: This study demonstrated that MRSA and related resistance genes are prevalent in HAIs, especially in patients in the ICUs and surgical wards.

References

1.Karamolahi S, Kaviar VH, Haddadi MH, Hashemian M, Feizi J, Sadeghifard N, Khoshnood S. Molecular characterization of Staphylococcus aureus isolated from hospital-acquired infections in Ilam, Iran. Molecular biology reports. 2024;51(1):686.

2.Alhazmi JS, Al-Khaldi AS, Kaabia NM, Bouafia NA, Mohammed YK, Al Garni MA, Odayani AN. Epidemiology and risk factors of methicillin-resistant Staphylococcus aureus (MRSA) infections in a tertiary care hospital in Saudi Arabia: an 8-year retrospective analysis. Saudi Medical Journal. 2025;46(8):891.

3.Kirkliauskienė A, Kriščiūnas J, Miciulevičienė J, Radzišauskienė D, Kačergius T, Bratchikov M, Kaplerienė L. Antimicrobial resistance and the prevalence of the Panton-Valentine Leukocidin gene among clinical isolates of Staphylococcus aureus in Lithuania. Polish Journal of Microbiology. 2024;73(1):21.

4.Sohail M, Muzzammil M, Ahmad M, Rehman S, Garout M, Khojah TM, Al-Eisa KM, Breagesh SA, Hamdan RM, Alibrahim HI, Alsoliabi ZA. Molecular characterization of community-and hospital-acquired methicillin-resistant Staphylococcus aureus isolates during COVID-19 pandemic. Antibiotics. 2023;12(1):157.

5.Kmiha S, Jouini A, Zerriaa N, Hamrouni S, Thabet L, Maaroufi A. Methicillin-resistant Staphylococcus aureus strains isolated from burned patients in a Tunisian hospital: molecular typing, virulence genes, and antimicrobial resistance. Antibiotics. 2023;12(6):1030.

6.Idrees MM, Saeed K, Shahid MA, Akhtar M, Qammar K, Hassan J, Khaliq T, Saeed A. Prevalence of mecA-and mecC-associated methicillin-resistant Staphylococcus aureus in clinical specimens, Punjab, Pakistan. Biomedicines. 2023;11(3):878.

7.Loor-Giler A, Paredes-Olmedo M, Cevallos-Robalino D, Villavicencio F, Zurita J, Escandón-Vargas K. mecA and mecC positive strains of Staphylococcus aureus. Antibiotics. 2025;14(12):1255.

8.Hegazy EE, ElNaghy WS, Shalaby MM, Shoeib SM, Abdeen NS, Fouda MH, Elshora OA, Elnaggar MH, Elrefaey W, Hagag RY, Elhadidy AA. Study of Class 1, 2, and 3 Integrons, Antibiotic Resistance Patterns, and Biofilm Formation in Clinical Staphylococcus aureus Isolates from Hospital-Acquired Infections. Pathogens. 2025;14(7):705.

9.Worku S, Abebe T, Seyoum B, Alemu A, Shimelash Y, Yimer M, Abdissa A, Beyene GT, Swedberg G, Mihret A. Molecular epidemiology of methicillin-resistant Staphylococcus aureus among patients diagnosed with surgical site infection at four hospitals in Ethiopia. Antibiotics. 2023;12(12):1681.

10.Saraiva MM, Rodrigues HL, Benevides VP, de Leon CM, Santos SC, Stipp DT, Givisiez PE, Vieira RF, Oliveira CJ. Antimicrobial resistance patterns of Staphylococcus aureus cultured from the healthy horses’ nostrils sampled in distant regions of Brazil. Antibiotics. 2025;14(7):693.

11.Sahle B, Merid Y. Prevalence and antibiotic resistance of Staphylococcus aureus in wound infections: a hospital study in Hawassa, Ethiopia. Journal of Infection in Developing Countries. 2024;18(10):1530-1538.

12.Johan MP, Arden F, Usman MA, Sakti M, Arifin J, Sjahril R, Ilhamjaya AM, Patellongi I, Muhammad M, Seweng A, Rahmansyah N. Correlation between carriers of Methicillin-resistant Staphylococcus aureus and the incidence of MRSA surgical site infections in orthopedic surgery patients. European Review for Medical & Pharmacological Sciences. 2024;28(10):3503-3512.

13.Troeman DP, Hazard D, Timbermont L, Malhotra-Kumar S, Van Werkhoven CH, Wolkewitz M, Ruzin A, Goossens H, Bonten MJ, Harbarth S, Sifakis F. Postoperative Staphylococcus aureus infections in patients with and without preoperative colonization. JAMA network open. 2023;6(10):e2339793.

14.Said KB, Alshammari K, Ahmed RM, Alshammari F, Jadani AH, Rakha I, Almijrad SA, Almallahi AE, Alkharisi B, Altamimi NM, Mahmoud T. MRSA Profiles Reveal Age-and Gender-Specificity in a Tertiary Care Hospital: High Burden in ICU Elderly and Emerging Community Patterns in Youth. Microorganisms. 2025;13(5):1078.

15.Alfouzan WA, Boswihi SS, Udo EE. Methicillin-Resistant Staphylococcus aureus (MRSA) in a tertiary care hospital in Kuwait: a molecular and genetic analysis. Microorganisms. 2023;12(1):17.

16.Dendi FZ, Allem R, Sebaihia M, Bensefia S, Cheurfa M, Alamir H, Obeagu EI. Prevalence and molecular detection of Staphylococcus aureus resistance to antibiotics. Medicine. 2024;103(24):e38562.

17.Batool S, Saleem W, Ahmad K, Khan SH. Antibiotic resistance and antibiotic resistance genes in Staphylococcus aureus isolates from hospital patients in Islamabad, Pakistan. Pakistan Journal of Zoology. 2026;58(1):205-214.

18.Patcharawalai W, Panida N, Sirigade R, Apichai S, Prawet S, Oralak S, Crawford JM, Sidhartha C, Paphavee L. Molecular Characterization of Clinical Isolates of Methicillin-Resistant Staphylococcus aureus from Chonburi, Thailand. Pathogens. 2025;14(5):406.

19.Che Hamzah AM, Chew CH, Al-Trad EA, Puah SM, Chua KH, A. Rahman NI, Ismail S, Maeda T, Palittapongarnpim P, Yeo CC. Whole genome sequencing of methicillin-resistant Staphylococcus aureus clinical isolates from Terengganu, Malaysia, indicates the predominance of the EMRSA-15 (ST22-SCC mec IV) clone. Scientific Reports. 2024;14(1):3485.

20.Egyir B, Owusu-Nyantakyi C, Bortey A, Rabbi Amuasi G, Owusu FA, Boateng W, Ahmed H, Danso JK, Oclu AA, Mohktar Q, Tetteh-Ocloo G. Whole genome sequencing revealed high proportions of ST152 MRSA among clinical Staphylococcus aureus isolates from ten hospitals in Ghana. Msphere. 2024;9(12):e00446-24.

21.Manouchehrifar M, Khademi F, Peeri Doghaheh H, Habibzadeh S, Arzanlou M. Macrolide-lincosamide resistance and virulence genes in Staphylococcus aureus isolated from clinical specimens in Ardabil, Iran. Iranian Journal of Pathology. 2023;18(4):415-424.

22.El-Banna TES, Sonbol FI, Kamer AMA, Badr SAMM. Genetic diversity of macrolides resistant Staphylococcus aureus clinical isolates and the potential synergistic effect of vitamins C and K3. BMC Microbiology. 2024;24(1):30.

23.AbdAlhafiz AI, Elleboudy NS, Aboshanab KM, Aboulwafa MM, Hassouna NA. Phenotypic and genotypic characterization of linezolid resistance and the effect of antibiotic combinations on methicillin-resistant Staphylococcus aureus clinical isolates. Annals of clinical microbiology and antimicrobials. 2023;22(1):23.

24.Tawfeek CE, Salim SA, Soliman MS, El-Baky RMA, Gad GF, Ashour MS. Reduced vancomycin susceptibility in Staphylococcus aureus: phenotypic and molecular characterization of clinical isolates. BMC Infectious Diseases. 2024;24(1):1201.

25.Aslanimehr M, Ranjbar R, Yadegar A, Sadeghifard N, Taherikalani M. Phenotypic and molecular characterization of vancomycin and linezolid resistance among methicillin-resistant Staphylococcus aureus clinical isolates. Archives of Clinical Infectious Diseases. 2023;18(6):e132652.

26.Jover-Sáenz A, Ramírez-Hidalgo M, Bellés Bellés A, Ribes Murillo E, Batlle Bosch M, Ribé Miró A, Mari López A, Cayado Cabanillas J, Piqué Palacín N, Garrido-Calvo S, Ortiz Valls M. Effects of a primary care antimicrobial stewardship program on meticillin-resistant Staphylococcus aureus strains across a region of Catalunya (Spain) over 5 years. Antibiotics. 2024;13(1):92.

27.Junaid M, Sadiq I. Evaluating the Antibiotic therapy in diabetic patients in diverse clinical settings. Journal of Biomolecules, Pathogenesis and Therapeutics. 2025;1(1):13–17.

Asghar N, Ali F, Akram M, Khan EE, Ullah K. Molecular Inflammatory, Oxidative Stress, and Angiogenic Pathways in Diabetic Foot Ulcer Pathogenesis: A Systematic Review and Meta-Analysis. Journal of Biomolecules, Pathogenesis and Therapeutics. 2026;2(1):13-20.

Published

2026-03-31

Issue

Section

Research Article

How to Cite

Detection of Methicillin Resistant Staphylococcus aureus and Associated Resistance Genes in Hospital Acquired Infections. (2026). Pak-Euro Journal of Medical and Life Sciences, 9(1). https://doi.org/10.31580/gf8pa973

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